1. Soliman B, Ibrahim AF, Salem A, Ghazy M, Abo-Elfadl MT, ElHefnawi M, Flores M. (2026) Let-7a and miR-34a Interplay Potent Suppressive Roles in Hepatocellular Carcinoma via Co-Targeting FNDC3B, IGF2 and SOX4. International Journal of Molecular Sciences. 27(4):1714. https://doi.org/10.3390/ijms27041714.
2. Mokhtar, A., Hassan, E. A., Ghazy, M. A., Hammad, S. F., & Sayed, A. E. D. H. (2025). Histopathological and intestinal microbial changes in crayfish (Procambarus clarkii) after exposure to polyethylene nanoparticles (PE-NPS) and their remediation by Spirulina platensis. Marine Pollution Bulletin, 222, 118840.
3. Ayoub, A. M., Mahmoud, E. A. B., Mohamed, R. H., Tolba, M. M., Hassan, N. S., Ghazy, M. A. & ElHefnawi, M. (2025). BIRC5 as a master regulator in HCC: unraveling its role in tumor survival and therapeutic potential. Functional & Integrative Genomics, 25(1), 120.
4. Abdelmoneim, M. S., Dawood, M. F., Hafez, E. E., Hammad, S. F., & Ghazy, M. A. (2025) Unveiling the role of cadaverine in mitigating salinity and/or Bisphenol A toxicity in tomato plants and reduced Bisphenol A accumulation in tomato roots. Plant physiology and biochemistry: PPB, 224, 109799.
5. Elnabi, M. K. A., Ghazy, M. A., Ali, S. S., Eltarahony, M., & Nassrallah, A. (2025). Efficient biodegradation and detoxification of reactive black 5 using a newly constructed bacterial consortium. Microbial Cell Factories, 24(1), 154.
6. Mohamed, F. S., Jalal, D., Fadel, Y. M., El-Mashtoly, S. F., Khaled, W. Z., Sayed, A. A., & Ghazy, M. A. (2025). Characterization and comparative profiling of piRNAs in serum biopsies of pediatric Wilms tumor patients. Cancer Cell International, 25(1), 163.
7. Anifowose, L. O., Adegboyega, F. N., Ogunyemi, O. M., Akano, R. O., Adeyemo-Salami, O. A., Hammad, S. F., & Ghazy, M. A. (2025). Disruption of Oncogenic MCL-1-BAX/BAK Interaction Using Integrase Inhibitors: Insights from a Molecular Docking and Dynamic Exploration. Discov. Chem. 2, 143. https://doi.org/10.1007/s44371-025-00222-y.
8. Salem, H. S., Abouzeid, M., Ghazy, M. A. & Ibrahim, N. A. (2025). Diversity of culturable mycoendophytes in Egyptian Red Sea mangrove Avicennia marina. Egyptian Journal of Botany, 65(1), 219-231.
9. Barac, D., Abdel-Mawgood, A., Awad, S., Ghazy, M. A. & Mansour, H. (2024). Multiplex PCR-based genotyping of Salmonella Enteritidis and Salmonella Typhimurium from food sources and assessment of their antimicrobial resistance profiles in Egypt. Molecular Biology Reports, 51(1), 794.
10. Soudan, H. M., Soliman, M. E., Fath El-Bab, A. M.R., Ghazy, M. A., Hammad, S. F. (2024). Biocompatible, controlled-release remdesivir-loaded liposomes tackling the telomerase activity of Non-Small cell lung cancer cells: Preparation, characterization, in vitro biological evaluation, and molecular docking analysis, Current Research in Biotechnology, https://doi.org/10.1016/j.crbiot.2024.100256.
11. Adegboyega, F. N., Anifowose, L. O., Hammad, S. F., & Ghazy, M. A. (2024). Repurposing Antiviral Drugs as Potential Anti‐EGFR Agents in NSCLC: A Structure‐Based Screening and Molecular Dynamics Analysis. Chemistry & Biodiversity, 21(11), e202400898.
12. Abdelmoneim, M. S., Hafez, E. E., Dawood, M. F., Hammad, S. F., & Ghazy, M. A. (2024). Biomolecular concepts: Toxicity of bisphenol A and p-nitrophenol on tomato plants: Morpho-physiological, ionomic profile, and antioxidants/defense-related gene expression studies.
13. El-Kurdi, N., El-Shatoury, S., ElBaghdady, K., Hammad, S.F., Ghazy, M.A. (2024). Biodegradation of polystyrene nanoplastics by Achromobacter xylosoxidans M9 offers a mealworm gut-derived solution for plastic pollution. Arch Microbiol. doi: 10.1007/s00203-024-03947.
14. Barac, D., Mansour, H., Awad, S., Ghazy, M. A., & Abdel-Mawgood, A. (2024). Prevalence of non-typhoidal Salmonellae in the retail chicken meat in Alexandria, Egypt. Indian Journal of Microbiology, 64(4), 1680-1684.
15. El-Kurdi, N., ElBaghdady, K., El-Shatoury, S., Hammad, S.F., Ghazy, M.A. (2024). Sustainable Removal of Nanoplastics: Exploiting the Lipolytic Activity of Pseudomonas aeruginosa O6 Isolated from Mariout Wetland, Egypt. Egyptian Journal of Aquatic Biology and Fisheries, 28, 2, 2024, 247-272. doi: 10.21608/ejabf.2024.347346.
16. Mohamed, F. S., Jalal, D., Fadel, Y. M., El-Mashtoly, S. F., Khaled, W. Z., Sayed, A. A., & Ghazy, M. A. (2024). Profiling of the serum MiRNAome in pediatric egyptian patients with wilms tumor. Frontiers in Molecular Biosciences, 11, 1453562.
17. Rafat, M., Ghazy, M. A., & Nasr, M. (2024). Phycoremediation of 1, 4 dioxane-laden wastewater: A Techno-economic and sustainable development approach. Journal of Environmental Management, 370, 122387.
18. Anifowose, L.O., Paimo, O.K., Adegboyega, F.N., Ogunyemi, O.M., Akano, R.O., Hammad, S.F., Ghazy, M.A. (2023). Molecular docking appraisal of Dysphania ambrosioides phytochemicals as potential inhibitor of a key triple-negative breast cancer driver gene. In Silico Pharmacol., 14;11(1):15. doi: 10.1007/s40203-023-00152-6.
19. Ibrahiem, H., Ismail, G.S.M., Migahid M.M., Ghazy M.A., Nasr M. (2023). Dual phytoremediation and biochar production by Eichhornia crassipes in hydroponic system receiving different 1,4-dioxane dosages. Int J Phytoremediation, 26(4):546-556. doi: 10.1080/15226514.2023.2253915.
20. Abdelmoneim, M., Hafez, E., Dawood, M., Hammad, S.F., Ghazy, M.A. (2023). The Role of Tubulin and Thaumatin Genes and Osmotic Factors in Salinity Tolerance of Tomato Plants. The Eurasia Proceedings of Health, Environment and Life Sciences. 124-134. 10.55549/ephels.103.
21. Elreedy, H.A., Elfiky, A.M., Mahmoud, A.A., Ibrahim, K.S., Ghazy, M.A. (2023). Neuroprotective effect of quercetin through targeting key genes involved in aluminum chloride induced Alzheimer’s disease in rats. Egyptian Journal of Basic and Applied Sciences, 10(1), 174–184. https://doi.org/10.1080/2314808X.2022.2164136.
22. Elreedy, H.A., Elfiky, A.M., Mahmoud, A.A, Ibrahim, K.S., Ghazy, M.A. (2022). Effect of quercetin as therapeutic and protective agent in Aluminum Chloride-induced Alzheimer's disease rats. Egyptian Journal of Chemistry, 65(4), 633-641. doi: 10.21608/ejchem.2021.99971.4647.
23. Elfiky, A.M., Mahmoud, A.A, Elreedy, H.A., Ibrahim, K.S., Ghazy, M.A. (2021). Quercetin stimulates the non-amyloidogenic pathway via activation of ADAM10 and ADAM17 gene expression in aluminum chloride-induced Alzheimer's disease rat model. Life Sci. doi: 10.1016/j.lfs.2021.119964.
24. Soliman, B., Salem, A., Ghazy, M. A., Abu-Shahba, N., and El Hefnawi, M. (2018). Bioinformatics functional analysis of let-7a, miR-34a, and miR-199a/b reveals novel insights into immune system pathways and cancer hallmarks for hepatocellular carcinoma. Tumor Biol. 40 (5) doi:10.1177/1010428318773675.
25. Kim, J.S., Nanfara, M.T., Chodavarapu, S., Jin, K.S., Babu, V.M., Ghazy, M.A., Chung, S., Kaguni, J.M., Sutton, M.D. and Cho, Y. (2017). Dynamic assembly of Hda and the sliding clamp in the regulation of replication licensing. Nucleic Acids Res doi: 10.1093/nar/gkx081.
26. Nanfara, M., Babu, V. M., Ghazy, M. A., and Sutton M.D. (2016). Identification of β clamp-DNA interaction regions that impair the ability of E. coli to tolerate specific classes of DNA damage. PLOS One DOI:10.1371/journal.pone.0163643.
27. Metwally, F. M., Mohamed, M. M., Sharaf, N. E., Ghazy, M. A., El Mishad A. M., Elfiky, A. (2016). The Impact of Bisphenol A (BPA) As Environmental Obesogen on Lipids and Lipids Metabolism. Inter. J. Pharm. and Clin. Res. 8(9): 1323-1330.
28. Ahmed, H., Salem, A., Atta, H., Eskandar, E. F., Farrag, A. H., Ghazy, M. A., Salem, N. A. and Aglan, H. (2016). Updates in the pathophysiological mechanisms of Parkinson’s disease: Emerging role of bone marrow mesenchymal stem cells. World J Stem Cells. 8(3): 106–117. DOI: 10.4252/wjsc.v8.i3.106.
29. Abd El-Fatah, M. F., Ghazy, M. A., Mostafa, M. S., El-Attar, M. M. and Egiza, A. O. (2015). Identification of MMP-9 as a Biomarker for Detecting Progression of Chronic Obstructive Pulmonary Disease. Biochem Cell Biol. 93(6):541-7, DOI: 10.1139/bcb-2015-0073.
30. Ibrahim, M. A., Ghazy, A.M., Salem, A. M., Ghazy, M. A. and Abdel-Monsef, M. M. (2015). Biochemical Characterization of Buffalo Liver Glucose-6-Phosphate Dehydrogenase Isoforms. Protein J., 34(3): 193-204, DOI: 10.1007/s10930-015- 9615-0.
31. Ibrahim, M. A., Ghazy, A.M., Salem, A. M., Ghazy, M. A. and Abdel-Monsef, M. (2014). Purification and Characterization of Glucose-6-Phosphate Dehydrogenase from Camel Liver. Enzyme Research, Vol. 2014, 1-10, DOI:10.1155/2014/714054.
32. Ahmed, H., Salem, A., Atta, H., Ghazy, M. A., and Aglan, H. (2014). Do Adipose Tissue-Derived Mesenchymal Stem Cells Ameliorate Parkinson's Disease in Rat Model? Hum. Exp Toxicol. 33(12): 1217–1231, DOI: 10.1177/0960327114524238.
33. Abdallah, R.Z., Adel, M., Ouf, A., Sayed, A., Ghazy, M.A., Alam, I., Essack, M., Lafi, F., Bajic, V.B., El-Dorry, H. and Siam, R. (2014). Differential Aerobic Methanotrophs Communities in Red Sea Brine-Seawater Interfaces. Front. Microbiol. 5, 487, 1- 16, DOI: 10.3389/fmicb.2014.00487.
34. Ferreira, A. J. S., Siam, R., Setubal, J.C., Moustafa, A., Sayed, A., Rania Chambergo, F.S., Dawe, A.S., Ghazy, M.A., Sharaf, H., Ouf, A., Alam, I., Abdel- Haleem, A.M., Lehvaslaiho, H., Ramadan, E., Antunes, A., Stingl, U., Archer, J.A.C., Jankovic, B.R., Sogin, M.L., Bajic, V.B., and El Dorry, H. (2014). Core Microbial Functional Activities in Ocean Environments Revealed by Global Metagenomic Profiling Analyses. PLOS ONE 9 (6): e97338.
35. Sayed, A., Ghazy, M.A., Ferreira, A.J.S., Ouf, A., Adel, M., Chambergo, F.S., Dawe, A.S., Archer, J., Baijic, V.B., Siam, R. and El-Dorry, H. (2014). A Novel Mercuric Reductase from the Unique Deep Brine Environment of Atlantis II in the Red Sea. J. Biol. Chem. 289 (3): 1675-1687.
36. Mohamed, Y.M., Ghazy, M.A., Sayed, A., Ouf, A., El-Dorry, H. and Siam, R. (2013). Isolation and Characterization of a Heavy Metal Resistant Thermophilic Esterase from the Atlantis II Red Sea Brine Pool. Sci Rep. 3: 3358.
37. Ezeokonkwo C., Ghazy M.A., Zhelkovsky A., Yeh P., and Moore C. (2012). Interactions at the Essential N-Terminus of poly(A) Polymerase that Could Regulate Poly(A) Addition in Saccharomyces cerevisiae. FEBS Letters 568 (8): 1173-1178.
38. Ghazy, M.A., Gordon J. M., Lee S.D., Singh B.N., Bohm A., Hampsey M., Moore C. (2012). The Interaction of Pcf11 and Clp1 is Needed for mRNA 3'- end Formation and is Modulated by Amino Acids in the ATP-Binding Site. Nucleic Acids Res 40 (3):1214-1225.
39. Ghazy, M.A., and Moore, C. (2010). Identification of Small-Molecule Inhibitors of mRNA 3’-end Formation in Yeast. Egyptian Journal of Biochemistry and Molecular Biology.
40. Krishnamurthy, S., Ghazy, M.A., and Moore, C., and Hampsey, M. (2009). Functional Interaction of the Ess1 Prolyl Isomerase with Components of the RNA Polymerase II Initiation and Termination Machineries. Mol. Cell. Biol. 29 (11): 2925-2934.
41. Ghazy, M.A., He, X., Singh, B.N., Hampsey, M., and Moore C. (2009). The Essential N-terminus of the Pta1 Scaffold Protein is Required for snoRNA Transcription Termination and Ssu72 Function but is Dispensable for Pre-mRNA 3’-end Processing. Mol. Cell. Biol. 29 (8): 2296-2307.
42. Saguez C., Schmid M., Olesen J. R., Ghazy, M.A., Poulsen M. B., Nasser T., Moore C., and Jensen T. H. (2008). Nuclear mRNA Surveillance in THO/sub2 Mutants is Triggered by Inefficient Polyadenylation. Mol. Cell 31(1): 91–103. (IF 14.018)
43. Majovski, R.C., Khaperskyy, D.A., Ghazy, M.A., and Ponticelli, A.S. (2005). A Functional Role for the Switch 2 Region of Yeast RNAPII in Transcription Start Site Utilization and Abortive Initiation. J. Biol. Chem. 280(41): 34917-23.
44. Ghazy, M.A., Brodie, S.A., Ammerman, M.L., Ziegler, L.M. and Ponticelli, A.S. (2004). Amino Acid Substitutions in Yeast TFIIF Confer Upstream Shifts in Transcription Initiation and Altered Interaction with RNA Polymerase II. Mol. Cell. Biol. 24: 10975-85.
45. Pardee,T.S., Ghazy, M.A., and Ponticelli, A.S. (2003). Yeast and Human RNA Polymerase II Elongation Complexes: Evidence for Functional Differences and Postinitiation Recruitment of Factors. Eukaryotic Cell. 2: 318-327.
